Update Qodana workflow: add compile step and include generated sources for resolution

- Introduced a compile step (skipping tests) to prepare classes for import resolution.
- Adjusted `qodana.yaml` to include generated sources instead of excluding them, preventing unresolved imports.

.github/workflows/qodana_code_quality.yml

@@ -45,13 +45,56 @@ jobs:
         uses: actions/checkout@v4
         with:
           fetch-depth: 0
+      
+      # Set up JDK for potential code generation (e.g., protobuf) prior to Qodana analysis
+      - name: Set up Java 17
+        uses: actions/setup-java@v4
+        with:
+          distribution: 'temurin'
+          java-version: '17'
+          cache: 'maven'
+
+      # Generate sources so that Qodana resolves imports from generated code
+      - name: Generate sources (protobuf)
+        shell: bash
+        run: |
+          if [ -f ./mvnw ]; then chmod +x ./mvnw || true; fi
+          if [ -x ./mvnw ]; then
+            ./mvnw -B -DskipTests -DskipITs=true generate-sources || true
+          elif command -v mvn >/dev/null 2>&1; then
+            mvn -B -DskipTests -DskipITs=true generate-sources || true
+          else
+            echo "[Qodana prep] Maven not available; skipping generate-sources"
+          fi
+
+      # Optionally compile (skip tests) to ensure classes are available for resolution
+      - name: Compile (skip tests)
+        shell: bash
+        run: |
+          if [ -x ./mvnw ]; then
+            ./mvnw -B -DskipTests -DskipITs=true compile || true
+          elif command -v mvn >/dev/null 2>&1; then
+            mvn -B -DskipTests -DskipITs=true compile || true
+          else
+            echo "[Qodana prep] Maven not available; skipping compile"
+          fi
+
+      # Helpful debug: list generated sources if present
+      - name: Show generated sources
+        shell: bash
+        run: |
+          echo "=== target/generated-sources (tree) ===" || true
+          if [ -d target/generated-sources ]; then
+            find target/generated-sources -maxdepth 3 -type d -print || true
+          else
+            echo "(none)" || true
+          fi
       - name: 'Qodana Scan'
         uses: JetBrains/qodana-action@v2025.2
         with:
           # Enable PR-specific reporting only for pull_request events
           pr-mode: ${{ github.event_name == 'pull_request' }}
-          # Pass the linter image via args (the action does not support an `image` input)
+          # No extra args needed; linter is defined in qodana.yaml (qodana-jvm)
-          args: --image jetbrains/qodana-jvm:2025.2
         env:
           QODANA_TOKEN: ${{ secrets.QODANA_TOKEN_268690425 }}
           QODANA_ENDPOINT: 'https://qodana.cloud'

qodana.yaml

@@ -3,28 +3,19 @@
 ####################################################################################################################
 
 version: "1.0"
-linter: jetbrains/qodana-jvm:2025.2
+# Use canonical linter name to avoid image warnings and CLI flag issues
+linter: qodana-jvm
 profile:
   name: qodana.recommended
 bootstrap: |
-  # Generate sources (including protobuf) so Qodana resolves imports correctly
+  # Disabled bootstrap to avoid shell parsing issues in CI. If you need code generation,
-  # Prefer Maven Wrapper if present; fall back to system mvn (POSIX sh compatible)
+  # we can re-enable a robust script later. For now, do nothing and let Qodana run.
-  # Ensure mvnw is executable if present
+  :
-  if [ -f ./mvnw ]; then chmod +x ./mvnw || true; fi
-  if [ -x ./mvnw ]; then
-    ./mvnw -B -q -DskipTests -DskipITs=true generate-sources || true
-  elif [ -f ./mvnw ]; then
-    sh ./mvnw -B -q -DskipTests -DskipITs=true generate-sources || true
-  elif command -v mvn >/dev/null 2>&1; then
-    mvn -B -q -DskipTests -DskipITs=true generate-sources || true
-  else
-    echo "[Qodana bootstrap] Maven not available; skipping source generation"
-  fi
 include:
   - name: CheckDependencyLicenses
 exclude:
   # Exclude generated sources from inspections to reduce noise
   - name: All
     paths:
-      - target/generated-sources/**
+      - target/protoc-dependencies/**
-      - target/protoc-dependencies/**
+      # Keep generated sources included for indexing/resolution; excluding them can cause unresolved imports